GENESIS RELEASE NOTES

Release 2.0/4

  • New interactive dashboard with two panels: 

    • a data and user-oriented summary; 

    • categorization of all variants in GENESIS

  • New and simplified procedure to invite new lab members, assign roles, and invite new non-GENESIS users; this does not require RSVP anymore and is email notification based

  • Revised and simplified lab creation

  • 2-fold speed improvement of loading the LAB page

  • New and simplified procedure to invite new project members, assign roles, and invite new non-genesis users; this does not require RSVP anymore and is email notification based

  • Revised and simplified project creation page

  • Revised LAB sidebar tracking of new labs and recently joined lab member

  • Revised PROJECT sidebar with tracking of new projects and recently joined project member

 

Release 2.0/3

  • Revise Lab role permissions to allow Members to view and query Individuals

  • Option to select individuals without a solved gene in 'Select Data' tab

  • Query results are annotated with:

    • a green indicator next to FamilyId if the family has a Solved Gene

    • a red indicator next to Protein Notation if the variant is reported in ClinVar as pathogenic or likely pathogenic.

  • Remove Alignment Status and Variant Calling Status columns from Genomic Data table

  • New user registration requires agreement to terms of service and privacy policy via checkbox

Release 2.0/2

  • Query results contain two additional columns: reference allele and alternate allele

  • Variant details header contains link-outs to Ensembl for the relevant protein and cDNA changes

  • Help menu added in navigation bar with links to relevant pages on tgp-foundation.org

  • New login portal available on tgp-foundation.org

  • Login window has options allowing authentication of users from partner organization (Beta)

  • Mendelian analysis module is presented immediately after login (instead of Dashboard)

  • Projects are sorted in alphabetical order in the 'Select Data' tab

  • Fix bug in the sorting by genomic position in query results

  • Updated logo

  • Simplify user interface to remove unsupported and deprecated features: 

    • Feedback service

    • Notification icons and profile photo

    • Search users field

    • 'Select from Individual Grid' option in 'Select Data' tab

    • 'Trials' in navigation bar

    • Refine appearance and styling of query results table​